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Support inclusion of build-time and runtime dependencies - #99

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Support inclusion of build-time and runtime dependencies#99
pont-us wants to merge 5 commits into
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pont-us/98-build-deps

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@pont-us

@pont-us pont-us commented Sep 4, 2026

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Closes #98

Initial implementation of #98. Basic functionality tested
but still needs more testing, evaluation, and documentation.
@codecov

codecov Bot commented Sep 4, 2026

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Codecov Report

❌ Patch coverage is 73.17073% with 11 lines in your changes missing coverage. Please review.
✅ Project coverage is 96.73%. Comparing base (ed2fd49) to head (b1c249e).
⚠️ Report is 1 commits behind head on main.

Files with missing lines Patch % Lines
xcengine/core.py 52.17% 9 Missing and 2 partials ⚠️
Additional details and impacted files
@@            Coverage Diff             @@
##             main      #99      +/-   ##
==========================================
- Coverage   97.83%   96.73%   -1.11%     
==========================================
  Files           6        6              
  Lines         647      765     +118     
  Branches       77      109      +32     
==========================================
+ Hits          633      740     +107     
- Misses          9       18       +9     
- Partials        5        7       +2     

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- Add a code snippet to make sure that the notebook's parent directory
  is on the Python path during parameter extraction.

- Make sure that files copied into container are owned by mambauser.

- Don't strip root directory when copying includes into container image.
Emphasize that the parameters cell should be the first code cell
whenever possible.
Recent additions to the parameter-extraction code try to add the
notebook path's parent directory to the Python path, which naturally
fails if the notebook path is a URL rather than a local path. This
commit ensures that a parent "directory" really is a directory before
trying to put it on the Python path.
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Inclusion of build-time and runtime dependencies during docker image build

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