core-package

Efficient manipulation of biological strings

Bioconductor facilities for parallel evaluation

Representation and manipulation of genomic intervals

[DEPRECATED] An R package for Google Genomics API queries.

A container (S4 class) for matrix-like assays

Utilities for manipulating chromosome names, including modifying them to follow a particular naming style

Annotation of Genetic Variants

Binary alignment (BAM), FASTA, variant call (BCF), and tabix file import

A unified framework for working transparently with on-disk and in-memory array-like datasets

Query the gene models of a given organism/assembly

Foundation of integer range manipulation in Bioconductor

Client for the Bioconductor AnnotationHub web resource

Foundation of vector-like and list-like containers in Bioconductor

Issues and pull requests for BiocStyle should go here.

Client-side REST access to KEGG

Manage Files Across Sessions

Defines many S4 generic functions used in Bioconductor

High-performance sparse data representation and manipulation in R

HDF5 datasets as array-like objects in R

S4 Generic Summary Statistic Functions that Operate on Matrix-Like Objects