Prepare PC links for embedding into bioinformatic portals

[IgorRodchenkov]

Once we'd implemented Pathway Commons landing page/app(s) to be linked, learn data submission protocol and format for UniProt, GeneCards, Entrez (NCBI Gene), and generate corresponding data files as part of PC db release.

[IgorRodchenkov]

@jvwong @gbader
See:

• UniProt - cross-references section (apply via the form);
• GeneCards - Pathways & Interaction section I guess - at least, we have to register Pathway Commons in their sources and perhaps configure something there...
• NCBI Gene - Gene LinkOut, e.g., NOG, for example; see also this, specifically, this guide.

[IgorRodchenkov]

Submitted the following metadata to UniProt:

Name: Pathway Commons - a web resource for biological pathway data
Servers: http://www.pathwaycommons.org
URL template: http://apps.pathwaycommons.org/search?type=Pathway&q=%u
Citation: [PubMed:21071392][DOI:10.1093/nar/gkq1039]
Link type: Explicit
Category: Enzyme and pathway databases
Note: Pathway Commons is currently focused only on human pathways and interactions

@gaelder @jvwong @d2fong

[IgorRodchenkov]

Also contacted NCBI for inclusion into Gene and PubMed LinkOut resources.